Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	STX1A	HGNC:11433 (HGNC) 6804 (Entrez Gene) 186590 (OMIM) STX1A (Alliance of Genome Resources)	Chr7 q11.23	Chr7:73699206-73719672 (-) GRCh38	Creutzfeldt-Jakob disease Hirschsprung's disease	Q16623 (UniProt | EBI) NM_001165903 (RefSeq)
mouse	Stx1a	MGI:109355 (MGI) 20907 (Entrez Gene) Gene Tree Stx1a (Alliance of Genome Resources)	Chr5 74.95 cM	Chr5:135052336-135079954 (+) GRCm39	disease of mental health	ENSMUSG00000007207 (Ensembl Gene Model) ENSMUSP00000005509 (Ensembl) ENSMUST00000005509 (Ensembl)
rat	Stx1a	RGD:69430 (Rat Genome Database) 116470 (Entrez Gene) Stx1a (Alliance of Genome Resources)	Chr12 q12			P32851 (UniProt | EBI) NM_053788 (RefSeq)
zebrafish	stx1a	ZDB-GENE-100802-1 (Zebrafish Model Organism Database) 100006625 (Entrez Gene) stx1a (Alliance of Genome Resources)	Chr15			XP_001345316 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.