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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AGAP1 HGNC:16922 (HGNC)
116987 (Entrez Gene)
608651 (OMIM)
AGAP1 (Alliance of Genome Resources)
Chr2 q37.2 Chr2:235494043-236131793 (+)
GRCh38
Q9UPQ3 (UniProt | EBI)
NM_001244888 (RefSeq)
AGAP5 HGNC:23467 (HGNC)
729092 (Entrez Gene)
AGAP5 (Alliance of Genome Resources)
Chr10 q22.2 A6NIR3 (UniProt | EBI)
NM_001144000 (RefSeq)
AGAP7P HGNC:23465 (HGNC)
653268 (Entrez Gene)
AGAP7P (Alliance of Genome Resources)
Chr Chr10:46109495-46131678 (+)
GRCh38
Q5VUJ5 (UniProt | EBI)
NM_001077685 (RefSeq)
AGAP9 HGNC:23463 (HGNC)
642517 (Entrez Gene)
AGAP9 (Alliance of Genome Resources)
Chr10 q11.22 Chr10:47501854-47523638 (-)
GRCh38
Q5VTM2 (UniProt | EBI)
NM_001190810 (RefSeq)
AGAP11 HGNC:29421 (HGNC)
119385 (Entrez Gene)
AGAP11 (Alliance of Genome Resources)
Chr10 q23.2 Chr10:86970336-87010226 (+)
GRCh38
Q8TF27 (UniProt | EBI)
NM_133447 (RefSeq)
mouse Agap1 MGI:2653690 (MGI)
347722 (Entrez Gene)
Gene Tree
Agap1 (Alliance of Genome Resources)
Chr1 45.06 cM Chr1:89382533-89823004 (+)
GRCm39
347722 (NCBI Gene Model)
Q8BXK8 (UniProt | EBI)
NM_178119 (RefSeq)
rat Agap1 RGD:1309244 (Rat Genome Database)
316611 (Entrez Gene)
Agap1 (Alliance of Genome Resources)
Chr9 q35-q36 NP_001101700 (RefSeq)
NM_001108230 (RefSeq)
zebrafish agap1 ZDB-GENE-130405-1 (Zebrafish Model Organism Database)
100148154 (Entrez Gene)
agap1 (Alliance of Genome Resources)
Chr6 XP_021327415 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory