Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Or52s1	MGI:3030427 (MGI) 258378 (Entrez Gene) Gene Tree Or52s1 (Alliance of Genome Resources)	Chr7 54.85 cM	Chr7:102861069-102862052 (+) GRCm39		258378 (NCBI Gene Model) NP_666492 (RefSeq) NM_146380 (RefSeq)
rat	Or52s1	RGD:1333158 (Rat Genome Database) 293227 (Entrez Gene) Or52s1 (Alliance of Genome Resources)	Chr1 q32			NP_001000137 (RefSeq) NM_001000137 (RefSeq)
zebrafish	or55e1	ZDB-GENE-990415-195 (Zebrafish Model Organism Database) 797584 (Entrez Gene) or55e1 (Alliance of Genome Resources)	Chr15			XP_003200052 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.