Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	STX3	HGNC:11438 (HGNC) 6809 (Entrez Gene) 600876 (OMIM) STX3 (Alliance of Genome Resources)	Chr11 q12.1	Chr11:59713456-59805882 (+) GRCh38	congenital diarrhea	Q13277 (UniProt | EBI) NM_001178040 (RefSeq)
mouse	Stx3	MGI:103077 (MGI) 20908 (Entrez Gene) Gene Tree Stx3 (Alliance of Genome Resources)	Chr19 8.52 cM	Chr19:11752482-11796767 (-) GRCm39		ENSMUSG00000041488 (Ensembl Gene Model) ENSMUSP00000069529 (Ensembl) ENSMUST00000069285 (Ensembl)
rat	Stx3	RGD:621005 (Rat Genome Database) 81802 (Entrez Gene) Stx3 (Alliance of Genome Resources)	Chr1 q43			Q08849 (UniProt | EBI) NM_031124 (RefSeq)
zebrafish	stx3a	ZDB-GENE-070620-13 (Zebrafish Model Organism Database) 571872 (Entrez Gene) stx3a (Alliance of Genome Resources)	Chr1			NP_001295756 (RefSeq) NM_001308827 (RefSeq)
	stx3b	ZDB-GENE-040426-1489 (Zebrafish Model Organism Database) 393515 (Entrez Gene) stx3b (Alliance of Genome Resources)	Chr14			NP_956837 (RefSeq) NM_200543 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.