Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TMT1A	HGNC:24550 (HGNC) 25840 (Entrez Gene) 618338 (OMIM) TMT1A (Alliance of Genome Resources)	Chr12 q13.12	Chr12:50923472-50932510 (+) GRCh38		Q9H8H3 (UniProt | EBI) NM_014033 (RefSeq)
mouse	Tmt1a	MGI:1916523 (MGI) 70152 (Entrez Gene) Gene Tree Tmt1a (Alliance of Genome Resources)	Chr15 56.25 cM	Chr15:100202021-100226543 (+) GRCm39		ENSMUSG00000054619 (Ensembl Gene Model) ENSMUSP00000065271 (Ensembl) ENSMUST00000067752 (Ensembl)
rat	Tmt1a	RGD:1308407 (Rat Genome Database) 315306 (Entrez Gene) Tmt1a (Alliance of Genome Resources)	Chr7 q36			NP_001032432 (RefSeq) NM_001037355 (RefSeq)
zebrafish	tmt1a.1	ZDB-GENE-061027-239 (Zebrafish Model Organism Database) 569131 (Entrez Gene) tmt1a.1 (Alliance of Genome Resources)	Chr6			NP_001073508 (RefSeq) NM_001080039 (RefSeq)
	tmt1a.2	ZDB-GENE-120215-62 (Zebrafish Model Organism Database) 569089 (Entrez Gene) tmt1a.2 (Alliance of Genome Resources)	Chr6			XP_021327508 (RefSeq)
	tmt1a.3	ZDB-GENE-120215-64 (Zebrafish Model Organism Database) 569046 (Entrez Gene) tmt1a.3 (Alliance of Genome Resources)	Chr6			NP_001373576 (RefSeq) NM_001386647 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.