Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	STAG2	HGNC:11355 (HGNC) 10735 (Entrez Gene) 300826 (OMIM) STAG2 (Alliance of Genome Resources)	ChrX q25	ChrX:123960212-124422664 (+) GRCh38	Holoprosencephaly 13, X-linked Mullegama-Klein-Martinez syndrome	Q8N3U4 (UniProt | EBI) NM_001375374 (RefSeq)
mouse	Stag2	MGI:1098583 (MGI) 20843 (Entrez Gene) Gene Tree Stag2 (Alliance of Genome Resources)	ChrX 23.19 cM	ChrX:41238194-41366062 (+) GRCm39		ENSMUSG00000025862 (Ensembl Gene Model) ENSMUSP00000110725 (Ensembl) ENSMUST00000115073 (Ensembl)
rat	Stag2	RGD:1562042 (Rat Genome Database) 313304 (Entrez Gene) Stag2 (Alliance of Genome Resources)	ChrX q35			NP_001166978 (RefSeq) NM_001173507 (RefSeq)
zebrafish	stag2a	ZDB-GENE-030131-3432 (Zebrafish Model Organism Database) 567168 (Entrez Gene) stag2a (Alliance of Genome Resources)	Chr5			NP_001093498 (RefSeq) NM_001100028 (RefSeq)
	stag2b	ZDB-GENE-030131-2785 (Zebrafish Model Organism Database) 560751 (Entrez Gene) stag2b (Alliance of Genome Resources)	Chr14			XP_021328466 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.