Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	Or1j18	MGI:3030181 (MGI) 258945 (Entrez Gene) Gene Tree Or1j18 (Alliance of Genome Resources)	Chr2 24.19 cM	Chr2:36624335-36625273 (+) GRCm39		258945 (NCBI Gene Model) NP_667154 (RefSeq) NM_146943 (RefSeq)
rat	Or1j13c	RGD:1333536 (Rat Genome Database) 296672 (Entrez Gene) Or1j13c (Alliance of Genome Resources)	Chr3 p11			NP_001000384 (RefSeq) NM_001000384 (RefSeq)
	Or1j16b	RGD:1334157 (Rat Genome Database) 296663 (Entrez Gene) Or1j16b (Alliance of Genome Resources)	Chr3 p11			NP_001000380 (RefSeq) NM_001000380 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.