Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PHC2	HGNC:3183 (HGNC) 1912 (Entrez Gene) 602979 (OMIM) PHC2 (Alliance of Genome Resources)	Chr1 p35.1	Chr1:33323623-33431095 (-) GRCh38		Q8IXK0 (UniProt | EBI) NM_004427 (RefSeq)
mouse	Phc2	MGI:1860454 (MGI) 54383 (Entrez Gene) Gene Tree Phc2 (Alliance of Genome Resources)	Chr4 62.12 cM	Chr4:128548495-128646674 (+) GRCm39		ENSMUSG00000028796 (Ensembl Gene Model) ENSMUSP00000101690 (Ensembl) ENSMUST00000106080 (Ensembl)
rat	Phc2	RGD:1307912 (Rat Genome Database) 313038 (Entrez Gene) Phc2 (Alliance of Genome Resources)	Chr5 q36			NP_001013187 (RefSeq) NM_001013169 (RefSeq)
zebrafish	phc2a	ZDB-GENE-020312-1 (Zebrafish Model Organism Database) 171465 (Entrez Gene) phc2a (Alliance of Genome Resources)	Chr23			Q8QHL5 (UniProt | EBI) NM_001136488 (RefSeq)
	phc2b	ZDB-GENE-040426-1113 (Zebrafish Model Organism Database) 394177 (Entrez Gene) phc2b (Alliance of Genome Resources)	Chr6			NP_957496 (RefSeq) NM_201202 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.