Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CAPNS1	HGNC:1481 (HGNC) 826 (Entrez Gene) 114170 (OMIM) CAPNS1 (Alliance of Genome Resources)	Chr19 q13.12	Chr19:36139953-36150353 (+) GRCh38		P04632 (UniProt | EBI) NM_001749 (RefSeq)
mouse	Capns1	MGI:88266 (MGI) 12336 (Entrez Gene) Gene Tree Capns1 (Alliance of Genome Resources)	Chr7 17.31 cM	Chr7:29886361-29898236 (-) GRCm39		ENSMUSG00000001794 (Ensembl Gene Model) ENSMUSP00000001845 (Ensembl) ENSMUST00000001845 (Ensembl)
rat	Capns1	RGD:2270 (Rat Genome Database) 29156 (Entrez Gene) Capns1 (Alliance of Genome Resources)	Chr1 q21			Q64537 (UniProt | EBI) NM_017118 (RefSeq)
zebrafish	capns1a	ZDB-GENE-030113-3 (Zebrafish Model Organism Database) 550598 (Entrez Gene) capns1a (Alliance of Genome Resources)	Chr5			NP_001017899 (RefSeq) NM_001017899 (RefSeq)
	capns1b	ZDB-GENE-030131-5206 (Zebrafish Model Organism Database) 560033 (Entrez Gene) capns1b (Alliance of Genome Resources)	Chr15			NP_001103176 (RefSeq) NM_001109706 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.