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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse BC051665 MGI:2682300 (MGI)
218275 (Entrez Gene)
Gene Tree
BC051665 (Alliance of Genome Resources)
Chr13 32.53 cM Chr13:60929701-60934178 (-)
GRCm39
218275 (NCBI Gene Model)
NP_954599 (RefSeq)
NM_199148 (RefSeq)
rat Cts7l2 RGD:1308751 (Rat Genome Database)
290981 (Entrez Gene)
Cts7l2 (Alliance of Genome Resources)
Chr17 p14 XP_225137 (RefSeq)
Ctsll3 RGD:1560071 (Rat Genome Database)
498691 (Entrez Gene)
Ctsll3 (Alliance of Genome Resources)
Chr17 p14 NP_001395605 (RefSeq)
NM_001408676 (RefSeq)
zebrafish ctsla ZDB-GENE-030131-106 (Zebrafish Model Organism Database)
321453 (Entrez Gene)
ctsla (Alliance of Genome Resources)
Chr5 NP_997749 (RefSeq)
NM_212584 (RefSeq)
ctslb ZDB-GENE-980526-285 (Zebrafish Model Organism Database)
30443 (Entrez Gene)
ctslb (Alliance of Genome Resources)
Chr12 NP_571273 (RefSeq)
NM_131198 (RefSeq)
ctsll ZDB-GENE-041010-76 (Zebrafish Model Organism Database)
449826 (Entrez Gene)
ctsll (Alliance of Genome Resources)
Chr5 NP_001005999 (RefSeq)
NM_001005999 (RefSeq)
si:dkey-239j18.2 ZDB-GENE-121214-52 (Zebrafish Model Organism Database)
321853 (Entrez Gene)
si:dkey-239j18.2 (Alliance of Genome Resources)
Chr12 NP_001274132 (RefSeq)
NM_001287203 (RefSeq)
si:dkey-239j18.3 ZDB-GENE-121214-39 (Zebrafish Model Organism Database)
100001785 (Entrez Gene)
si:dkey-239j18.3 (Alliance of Genome Resources)
Chr12 XP_001341714 (RefSeq)
si:dkey-269i1.4 ZDB-GENE-121214-37 (Zebrafish Model Organism Database)
564835 (Entrez Gene)
si:dkey-269i1.4 (Alliance of Genome Resources)
Chr12 NP_001099150 (RefSeq)
NM_001105680 (RefSeq)
zgc:174153 ZDB-GENE-080215-7 (Zebrafish Model Organism Database)
567623 (Entrez Gene)
zgc:174153 (Alliance of Genome Resources)
Chr12 NP_001104662 (RefSeq)
NM_001111192 (RefSeq)
zgc:174154 ZDB-GENE-071004-116 (Zebrafish Model Organism Database)
100537591 (Entrez Gene)
zgc:174154 (Alliance of Genome Resources)
Chr12 NP_001314908 (RefSeq)
NM_001327979 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory