Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SMARCD1	HGNC:11106 (HGNC) 6602 (Entrez Gene) 601735 (OMIM) SMARCD1 (Alliance of Genome Resources)	Chr12 q13.12	Chr12:50085200-50100707 (+) GRCh38	Coffin-Siris syndrome 11	Q96GM5 (UniProt | EBI) NM_139071 (RefSeq)
mouse	Smarcd1	MGI:1933623 (MGI) 83797 (Entrez Gene) Gene Tree Smarcd1 (Alliance of Genome Resources)	Chr15 56.13 cM	Chr15:99600175-99611872 (+) GRCm39		83797 (NCBI Gene Model) Q61466 (UniProt | EBI) NM_031842 (RefSeq)
rat	Smarcd1	RGD:1305406 (Rat Genome Database) 363002 (Entrez Gene) Smarcd1 (Alliance of Genome Resources)	Chr7			NP_001102222 (RefSeq) NM_001108752 (RefSeq)
zebrafish	smarcd1	ZDB-GENE-030131-1835 (Zebrafish Model Organism Database) 323115 (Entrez Gene) smarcd1 (Alliance of Genome Resources)	Chr22			NP_938172 (RefSeq) NM_198358 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.