Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PABPC1	HGNC:8554 (HGNC) 26986 (Entrez Gene) 604679 (OMIM) PABPC1 (Alliance of Genome Resources)	Chr8 q22.3	Chr8:100685816-100722809 (-) GRCh38		P11940 (UniProt | EBI) NM_002568 (RefSeq)
	PABPC3	HGNC:8556 (HGNC) 5042 (Entrez Gene) 604680 (OMIM) PABPC3 (Alliance of Genome Resources)	Chr13 q12.13	Chr13:25096136-25099254 (+) GRCh38		Q9H361 (UniProt | EBI) NM_030979 (RefSeq)
mouse	Pabpc1	MGI:1349722 (MGI) 18458 (Entrez Gene) Gene Tree Pabpc1 (Alliance of Genome Resources)	Chr15 14.51 cM	Chr15:36595902-36609825 (-) GRCm39		18458 (NCBI Gene Model) P29341 (UniProt | EBI) NM_008774 (RefSeq)
rat	Pabpc1	RGD:619838 (Rat Genome Database) 171350 (Entrez Gene) Pabpc1 (Alliance of Genome Resources)	Chr7 q22			Q9EPH8 (UniProt | EBI) NM_134353 (RefSeq)
zebrafish	pabpc1a	ZDB-GENE-030131-3238 (Zebrafish Model Organism Database) 606498 (Entrez Gene) pabpc1a (Alliance of Genome Resources)	Chr16			F1QB54 (UniProt | EBI) NM_001031676 (RefSeq)
	pabpc1b	ZDB-GENE-050308-1 (Zebrafish Model Organism Database) 393856 (Entrez Gene) pabpc1b (Alliance of Genome Resources)	Chr19			NP_957176 (RefSeq) NM_200882 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.