Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SGCD	HGNC:10807 (HGNC) 6444 (Entrez Gene) 601411 (OMIM) SGCD (Alliance of Genome Resources)	Chr5 q33.2-q33.3	Chr5:155727832-156767788 (+) GRCh38	autosomal recessive limb-girdle muscular dystrophy type 2F dilated cardiomyopathy 1L muscular dystrophy	Q92629 (UniProt | EBI) NM_001128209 (RefSeq)
mouse	Sgcd	MGI:1346525 (MGI) 24052 (Entrez Gene) Gene Tree Sgcd (Alliance of Genome Resources)	Chr11 28.09 cM	Chr11:46861904-47880309 (-) GRCm39	autosomal recessive limb-girdle muscular dystrophy type 2F dilated cardiomyopathy 1L	24052 (NCBI Gene Model) P82347 (UniProt | EBI) NM_011891 (RefSeq)
rat	Sgcd	RGD:1306638 (Rat Genome Database) 497892 (Entrez Gene) Sgcd (Alliance of Genome Resources)	Chr10 q21			NP_001128298 (RefSeq) NM_001134826 (RefSeq)
zebrafish	sgcd	ZDB-GENE-030131-3684 (Zebrafish Model Organism Database) 324961 (Entrez Gene) sgcd (Alliance of Genome Resources)	Chr21			NP_001001816 (RefSeq) NM_001001816 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.