Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	IFI44	HGNC:16938 (HGNC) 10561 (Entrez Gene) 610468 (OMIM) IFI44 (Alliance of Genome Resources)	Chr1 p31.1	Chr1:78649789-78664078 (+) GRCh38		Q8TCB0 (UniProt | EBI) NM_006417 (RefSeq)
mouse	Ifi44	MGI:2443016 (MGI) 99899 (Entrez Gene) Gene Tree Ifi44 (Alliance of Genome Resources)	Chr3 76.91 cM	Chr3:151436559-151455580 (-) GRCm39		99899 (NCBI Gene Model) Q8BV66 (UniProt | EBI) NM_133871 (RefSeq)
rat	Ifi44	RGD:1310523 (Rat Genome Database) 310969 (Entrez Gene) Ifi44 (Alliance of Genome Resources)	Chr2 q45			NP_001101199 (RefSeq) NM_001107729 (RefSeq)
zebrafish	ifi44a1	ZDB-GENE-090312-156 (Zebrafish Model Organism Database) 100148554 (Entrez Gene) ifi44a1 (Alliance of Genome Resources)	Chr1			XP_009304423 (RefSeq)
	ifi44a3	ZDB-GENE-030131-9145 (Zebrafish Model Organism Database) 100007581 (Entrez Gene) ifi44a3 (Alliance of Genome Resources)	Chr1			XP_005170930 (RefSeq)
	ifi44a4	ZDB-GENE-200128-3 (Zebrafish Model Organism Database) 103909973 (Entrez Gene) ifi44a4 (Alliance of Genome Resources)	ChrUN			XP_017209940 (RefSeq)
	ifi44a5	ZDB-GENE-090313-338 (Zebrafish Model Organism Database) 100007552 (Entrez Gene) ifi44a5 (Alliance of Genome Resources)	Chr1			XP_001345981 (RefSeq)
	ifi44a6	ZDB-GENE-030131-4806 (Zebrafish Model Organism Database) 326081 (Entrez Gene) ifi44a6 (Alliance of Genome Resources)	Chr1			NP_001410323 (RefSeq) NM_001423394 (RefSeq)
	ifi44a7	ZDB-GENE-090313-339 (Zebrafish Model Organism Database) 100150009 (Entrez Gene) ifi44a7 (Alliance of Genome Resources)	Chr1			XP_009304400 (RefSeq)
	ifi44a8	ZDB-GENE-050302-48 (Zebrafish Model Organism Database) 100007523 (Entrez Gene) ifi44a8 (Alliance of Genome Resources)	Chr1			XP_001345957 (RefSeq)
	ifi44c1	ZDB-GENE-070912-413 (Zebrafish Model Organism Database) 565664 (Entrez Gene) ifi44c1 (Alliance of Genome Resources)	Chr2			NP_001122200 (RefSeq) NM_001128728 (RefSeq)
	ifi44c2	ZDB-GENE-060929-1102 (Zebrafish Model Organism Database) 565601 (Entrez Gene) ifi44c2 (Alliance of Genome Resources)	Chr2			NP_001070637 (RefSeq) NM_001077169 (RefSeq)
	ifi44d	ZDB-GENE-200128-2 (Zebrafish Model Organism Database) 795887 (Entrez Gene) ifi44d (Alliance of Genome Resources)	Chr10			NP_001373548 (RefSeq) NM_001386619 (RefSeq)
	ifi44e	ZDB-GENE-131127-183 (Zebrafish Model Organism Database) 799658 (Entrez Gene) ifi44e (Alliance of Genome Resources)	Chr17
	ifi44f3	ZDB-GENE-050208-377 (Zebrafish Model Organism Database) 100005143 (Entrez Gene) ifi44f3 (Alliance of Genome Resources)	Chr22			XP_005170564 (RefSeq)
	ifi44f5	ZDB-GENE-050208-457 (Zebrafish Model Organism Database) 571364 (Entrez Gene) ifi44f5 (Alliance of Genome Resources)	Chr22			NP_001038683 (RefSeq) NM_001045218 (RefSeq)
	ifi44g	ZDB-GENE-200128-4 (Zebrafish Model Organism Database) 100538089 (Entrez Gene) ifi44g (Alliance of Genome Resources)	Chr22			XP_068072592 (RefSeq)
	si:ch211-197g15.9	ZDB-GENE-050208-616 (Zebrafish Model Organism Database) 555440 (Entrez Gene) si:ch211-197g15.9 (Alliance of Genome Resources)	Chr22			XP_021325263 (RefSeq)
	si:dkey-79f11.4	ZDB-GENE-090312-75 (Zebrafish Model Organism Database) 100007423 (Entrez Gene) si:dkey-79f11.4 (Alliance of Genome Resources)	ChrUN			XP_068073854 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.