Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	NANOG	HGNC:20857 (HGNC) 79923 (Entrez Gene) 607937 (OMIM) NANOG (Alliance of Genome Resources)	Chr12 p13.31	Chr12:7787794-7799146 (+) GRCh38		Q9H9S0 (UniProt | EBI) NM_001297698 (RefSeq)
	NANOGP1	HGNC:23099 (HGNC) 404635 (Entrez Gene) NANOGP1 (Alliance of Genome Resources)	Chr12 p13.31	Chr12:7892362-7899246 (+) GRCh38		Q8N7R0 (UniProt | EBI) NM_001001416 (RefSeq)
	NANOGP8	HGNC:23106 (HGNC) 388112 (Entrez Gene) NANOGP8 (Alliance of Genome Resources)	Chr15 q14	Chr15:35083410-35085295 (-) GRCh38		Q6NSW7 (UniProt | EBI) NM_001355281 (RefSeq)
mouse	Nanog	MGI:1919200 (MGI) 71950 (Entrez Gene) Gene Tree Nanog (Alliance of Genome Resources)	Chr6 57.8 cM	Chr6:122684448-122691592 (+) GRCm39		71950 (NCBI Gene Model) Q5TM83 (UniProt | EBI) NM_028016 (RefSeq)
rat	Nanog	RGD:1303178 (Rat Genome Database) 414065 (Entrez Gene) Nanog (Alliance of Genome Resources)	Chr4 q42			NP_001094251 (RefSeq) NM_001100781 (RefSeq)
zebrafish	nanog	ZDB-GENE-030131-5486 (Zebrafish Model Organism Database) 792333 (Entrez Gene) nanog (Alliance of Genome Resources)	Chr24			NP_001091862 (RefSeq) NM_001098392 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.