Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RAB5IF	HGNC:15870 (HGNC) 55969 (Entrez Gene) 619960 (OMIM) RAB5IF (Alliance of Genome Resources)	Chr20 q11.23	Chr20:36605779-36612557 (+) GRCh38	craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome 2	Q9BUV8 (UniProt | EBI) NM_199485 (RefSeq)
mouse	Rab5if	MGI:1914638 (MGI) 67388 (Entrez Gene) Gene Tree Rab5if (Alliance of Genome Resources)	Chr2 77.89 cM	Chr2:156705048-156715483 (+) GRCm39		ENSMUSG00000027637 (Ensembl Gene Model) ENSMUSP00000029165 (Ensembl) ENSMUST00000029165 (Ensembl)
rat	Rab5if	RGD:1307752 (Rat Genome Database) 296315 (Entrez Gene) Rab5if (Alliance of Genome Resources)	Chr3 q42			NP_001013944 (RefSeq) NM_001013922 (RefSeq)
zebrafish	rab5if	ZDB-GENE-030131-5938 (Zebrafish Model Organism Database) 334006 (Entrez Gene) rab5if (Alliance of Genome Resources)	Chr23			NP_956144 (RefSeq) NM_199850 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.