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Vertebrate Homology
Source
 Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)		 Associated Human Diseases Sequences
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human H2AC20 HGNC:4738 (HGNC)
8338 (Entrez Gene)
602797 (OMIM)
H2AC20 (Alliance of Genome Resources)
 Chr1 q21.2 Chr1:149886918-149887411 (+)
GRCh38 		Q16777 (UniProt | EBI)
NM_003517 (RefSeq)
mouse H2ac20 MGI:2448316 (MGI)
319176 (Entrez Gene)
Gene Tree
H2ac20 (Alliance of Genome Resources)
 Chr3 41.67 cM Chr3:96127728-96128209 (-)
GRCm39 		319176 (NCBI Gene Model)
Q64523 (UniProt | EBI)
NM_175662 (RefSeq)
rat H2ac20 RGD:1560965 (Rat Genome Database)
499675 (Entrez Gene)
H2ac20 (Alliance of Genome Resources)
 Chr2 q34 NP_001395771 (RefSeq)
NM_001408842 (RefSeq)
zebrafish h2ax2 ZDB-GENE-160113-112 (Zebrafish Model Organism Database)
100001004 (Entrez Gene)
h2ax2 (Alliance of Genome Resources)
 Chr7 NP_001373300 (RefSeq)
NM_001386371 (RefSeq)
hist1h2a1 ZDB-GENE-121214-150 (Zebrafish Model Organism Database)
560309 (Entrez Gene)
hist1h2a1 (Alliance of Genome Resources)
 Chr25
hist1h2a3 ZDB-GENE-070822-28 (Zebrafish Model Organism Database)
100125271 (Entrez Gene)
hist1h2a3 (Alliance of Genome Resources)
 Chr25 NP_001096634 (RefSeq)
NM_001103164 (RefSeq)
hist1h2a6 ZDB-GENE-030131-6292 (Zebrafish Model Organism Database)
100003969 (Entrez Gene)
hist1h2a6 (Alliance of Genome Resources)
 Chr7 NP_001232892 (RefSeq)
NM_001245963 (RefSeq)
hist1h2a8 ZDB-GENE-160113-105 (Zebrafish Model Organism Database)
103911344 (Entrez Gene)
hist1h2a8 (Alliance of Genome Resources)
 Chr7 XP_009301187 (RefSeq)
hist1h2a11 ZDB-GENE-081205-1 (Zebrafish Model Organism Database)
100004011 (Entrez Gene)
hist1h2a11 (Alliance of Genome Resources)
 Chr7 NP_001136058 (RefSeq)
NM_001142586 (RefSeq)
si:ch73-368j24.13 ZDB-GENE-160113-30 (Zebrafish Model Organism Database)
100000574 (Entrez Gene)
si:ch73-368j24.13 (Alliance of Genome Resources)
 Chr7 XP_001334871 (RefSeq)
si:ch211-113a14.7 ZDB-GENE-121214-148 (Zebrafish Model Organism Database)
101882533 (Entrez Gene)
si:ch211-113a14.7 (Alliance of Genome Resources)
 Chr25 XP_005163251 (RefSeq)
si:ch211-113a14.19 ZDB-GENE-121214-198 (Zebrafish Model Organism Database)
560527 (Entrez Gene)
si:ch211-113a14.19 (Alliance of Genome Resources)
 Chr25
si:ch211-113a14.25 ZDB-GENE-121214-152 (Zebrafish Model Organism Database)
561187 (Entrez Gene)
si:ch211-113a14.25 (Alliance of Genome Resources)
 Chr25 XP_009296490 (RefSeq)
si:ch1073-153i20.5 ZDB-GENE-160113-104 (Zebrafish Model Organism Database)
103911342 (Entrez Gene)
si:ch1073-153i20.5 (Alliance of Genome Resources)
 Chr7 NP_001410749 (RefSeq)
NM_001423820 (RefSeq)
si:ch1073-159d7.11 ZDB-GENE-160113-102 (Zebrafish Model Organism Database)
100151041 (Entrez Gene)
si:ch1073-159d7.11 (Alliance of Genome Resources)
 Chr7 XP_001920286 (RefSeq)
si:dkey-23a13.20 ZDB-GENE-160113-109 (Zebrafish Model Organism Database)
100004510 (Entrez Gene)
si:dkey-23a13.20 (Alliance of Genome Resources)
 Chr7 NP_001373637 (RefSeq)
NM_001386708 (RefSeq)
si:dkey-108k21.15 ZDB-GENE-131121-80 (Zebrafish Model Organism Database)
103909881 (Entrez Gene)
si:dkey-108k21.15 (Alliance of Genome Resources)
 Chr25 NP_001410745 (RefSeq)
NM_001423816 (RefSeq)
si:dkey-108k21.19 ZDB-GENE-131121-75 (Zebrafish Model Organism Database)
100333615 (Entrez Gene)
si:dkey-108k21.19 (Alliance of Genome Resources)
 Chr25 NP_001373609 (RefSeq)
NM_001386680 (RefSeq)
si:dkey-261m9.7 ZDB-GENE-131127-50 (Zebrafish Model Organism Database)
100004768 (Entrez Gene)
si:dkey-261m9.7 (Alliance of Genome Resources)
 Chr25 XP_001338956 (RefSeq)
si:dkey-261m9.11 ZDB-GENE-131127-102 (Zebrafish Model Organism Database)
563177 (Entrez Gene)
si:dkey-261m9.11 (Alliance of Genome Resources)
 Chr25 XP_009296467 (RefSeq)
si:dkey-261m9.18 ZDB-GENE-131127-83 (Zebrafish Model Organism Database)
100538134 (Entrez Gene)
si:dkey-261m9.18 (Alliance of Genome Resources)
 Chr25
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory