Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLC17A4	HGNC:10932 (HGNC) 10050 (Entrez Gene) 604216 (OMIM) SLC17A4 (Alliance of Genome Resources)	Chr6 p22.2	Chr6:25754699-25781199 (+) GRCh38		Q9Y2C5 (UniProt | EBI) NM_005495 (RefSeq)
mouse	Slc17a4	MGI:2442850 (MGI) 319848 (Entrez Gene) Gene Tree Slc17a4 (Alliance of Genome Resources)	Chr13 9.98 cM	Chr13:24081862-24098992 (-) GRCm39		319848 (NCBI Gene Model) Q5NCM1 (UniProt | EBI) NM_177016 (RefSeq)
rat	Slc17a4	RGD:1584758 (Rat Genome Database) 679784 (Entrez Gene) Slc17a4 (Alliance of Genome Resources)	Chr17 p11			NP_001258143 (RefSeq) NM_001271214 (RefSeq)
zebrafish	si:ch1073-513e17.1	ZDB-GENE-030131-7188 (Zebrafish Model Organism Database) 571066 (Entrez Gene) si:ch1073-513e17.1 (Alliance of Genome Resources)	Chr19			XP_021323860 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.