Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TCIM	HGNC:1357 (HGNC) 56892 (Entrez Gene) 607702 (OMIM) TCIM (Alliance of Genome Resources)	Chr8 p11.21	Chr8:40153482-40155310 (+) GRCh38		Q9NR00 (UniProt | EBI) NM_020130 (RefSeq)
mouse	Tcim	MGI:1916318 (MGI) 69068 (Entrez Gene) Gene Tree Tcim (Alliance of Genome Resources)	Chr8 12.47 cM	Chr8:24927188-24928962 (-) GRCm39		69068 (NCBI Gene Model) Q9D915 (UniProt | EBI) NM_026931 (RefSeq)
rat	Tcim	RGD:6499724 (Rat Genome Database) 684871 (Entrez Gene) Tcim (Alliance of Genome Resources)	Chr16			NP_001108515 (RefSeq) NM_001115043 (RefSeq)
zebrafish	tcima	ZDB-GENE-050320-36 (Zebrafish Model Organism Database) 541345 (Entrez Gene) tcima (Alliance of Genome Resources)	Chr5			NP_001013490 (RefSeq) NM_001013472 (RefSeq)
	tcimb	ZDB-GENE-030131-8182 (Zebrafish Model Organism Database) 558746 (Entrez Gene) tcimb (Alliance of Genome Resources)	Chr10			NP_001373599 (RefSeq) NM_001386670 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.