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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse Mup20 MGI:3651981 (MGI)
381530 (Entrez Gene)
Gene Tree
Mup20 (Alliance of Genome Resources)
Chr4 32.98 cM Chr4:61968471-61972395 (-)
GRCm39
ENSMUSG00000078672 (Ensembl Gene Model)
ENSMUSP00000073667 (Ensembl)
ENSMUST00000074018 (Ensembl)
rat Mup4 RGD:735211 (Rat Genome Database)
362527 (Entrez Gene)
Mup4 (Alliance of Genome Resources)
Chr5 q24 NP_942079 (RefSeq)
NM_198784 (RefSeq)
Mup4-ps6 RGD:41225607 (Rat Genome Database)
120102892 (Entrez Gene)
Mup4-ps6 (Alliance of Genome Resources)
Chr5
Mup4l1 RGD:1566134 (Rat Genome Database)
298109 (Entrez Gene)
Mup4l1 (Alliance of Genome Resources)
Chr5 q24 P02761 (UniProt | EBI)
NM_203512 (RefSeq)
Mup4l3 RGD:1593272 (Rat Genome Database)
298111 (Entrez Gene)
Mup4l3 (Alliance of Genome Resources)
Chr5 q24 NP_001019419 (RefSeq)
NM_001024248 (RefSeq)
Mup4l4 RGD:708501 (Rat Genome Database)
259244 (Entrez Gene)
Mup4l4 (Alliance of Genome Resources)
Chr5 q24 NP_671745 (RefSeq)
NM_147212 (RefSeq)
Mup5 RGD:735107 (Rat Genome Database)
298107 (Entrez Gene)
Mup5 (Alliance of Genome Resources)
Chr5 q24 NP_976070 (RefSeq)
NM_203325 (RefSeq)
Mup18 RGD:1583727 (Rat Genome Database)
500473 (Entrez Gene)
Mup18 (Alliance of Genome Resources)
Chr5 q24 XP_063117360 (RefSeq)
zebrafish ptgdsb.1 ZDB-GENE-030131-8436 (Zebrafish Model Organism Database)
336492 (Entrez Gene)
ptgdsb.1 (Alliance of Genome Resources)
Chr24 NP_998799 (RefSeq)
NM_213634 (RefSeq)
ptgdsb.2 ZDB-GENE-030911-3 (Zebrafish Model Organism Database)
751701 (Entrez Gene)
ptgdsb.2 (Alliance of Genome Resources)
Chr24 NP_001038878 (RefSeq)
NM_001045413 (RefSeq)
zgc:153704 ZDB-GENE-060929-1114 (Zebrafish Model Organism Database)
767759 (Entrez Gene)
zgc:153704 (Alliance of Genome Resources)
Chr5 NP_001070194 (RefSeq)
NM_001076726 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory