Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	UBB	HGNC:12463 (HGNC) 7314 (Entrez Gene) 191339 (OMIM) UBB (Alliance of Genome Resources)	Chr17 p11.2	Chr17:16380779-16382745 (+) GRCh38		P0CG47 (UniProt | EBI) NM_001281720 (RefSeq)
mouse	Ubb	MGI:98888 (MGI) 22187 (Entrez Gene) Gene Tree Ubb (Alliance of Genome Resources)	Chr11 38.46 cM	Chr11:62442329-62444037 (+) GRCm39		22187 (NCBI Gene Model) P0CG49 (UniProt | EBI) NM_011664 (RefSeq)
rat	Ubb	RGD:621562 (Rat Genome Database) 192255 (Entrez Gene) Ubb (Alliance of Genome Resources)	Chr10 q23			P0CG51 (UniProt | EBI) NM_138895 (RefSeq)
zebrafish	si:ch211-202a12.4	ZDB-GENE-030131-8486 (Zebrafish Model Organism Database) 336542 (Entrez Gene) si:ch211-202a12.4 (Alliance of Genome Resources)	Chr5			NP_001410090 (RefSeq) NM_001423161 (RefSeq)
	ubb	ZDB-GENE-050411-10 (Zebrafish Model Organism Database) 550134 (Entrez Gene) ubb (Alliance of Genome Resources)	Chr5			NP_001013290 (RefSeq) NM_001013272 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.