Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	NLRP4	HGNC:22943 (HGNC) 147945 (Entrez Gene) 609645 (OMIM) NLRP4 (Alliance of Genome Resources)	Chr19 q13.43	Chr19:55836540-55881855 (+) GRCh38		Q96MN2 (UniProt | EBI) NM_134444 (RefSeq)
mouse	Nlrp4f	MGI:2145528 (MGI) 97895 (Entrez Gene) Gene Tree Nlrp4f (Alliance of Genome Resources)	Chr13 34.45 cM	Chr13:65324925-65353530 (-) GRCm39		97895 (NCBI Gene Model) Q66X05 (UniProt | EBI) NM_175290 (RefSeq)
rat	Nlrp4f	RGD:1588619 (Rat Genome Database) 691086 (Entrez Gene) Nlrp4f (Alliance of Genome Resources)	Chr1			XP_038951893 (RefSeq)
zebrafish	nlrp16	ZDB-GENE-030131-8582 (Zebrafish Model Organism Database) 569464 (Entrez Gene) nlrp16 (Alliance of Genome Resources)	Chr15			XP_005157868 (RefSeq)
	si:ch211-181d7.1	ZDB-GENE-121214-14 (Zebrafish Model Organism Database) 100149909 (Entrez Gene) si:ch211-181d7.1 (Alliance of Genome Resources)	Chr15			XP_021322168 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.