Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PTX3	HGNC:9692 (HGNC) 5806 (Entrez Gene) 602492 (OMIM) PTX3 (Alliance of Genome Resources)	Chr3 q25.32	Chr3:157436850-157443633 (+) GRCh38	cystic fibrosis invasive aspergillosis	P26022 (UniProt | EBI) NM_002852 (RefSeq)
mouse	Ptx3	MGI:104641 (MGI) 19288 (Entrez Gene) Gene Tree Ptx3 (Alliance of Genome Resources)	Chr3 30.25 cM	Chr3:66127331-66133226 (+) GRCm39		ENSMUSG00000027832 (Ensembl Gene Model) ENSMUSP00000029421 (Ensembl) ENSMUST00000029421 (Ensembl)
rat	Ptx3	RGD:1593476 (Rat Genome Database) 689388 (Entrez Gene) Ptx3 (Alliance of Genome Resources)	Chr2 q31			NP_001103006 (RefSeq) NM_001109536 (RefSeq)
zebrafish	ptx3a	ZDB-GENE-030131-8720 (Zebrafish Model Organism Database) 101887125 (Entrez Gene) ptx3a (Alliance of Genome Resources)	Chr18			XP_021329017 (RefSeq)
	ptx3b	ZDB-GENE-081104-385 (Zebrafish Model Organism Database) 566001 (Entrez Gene) ptx3b (Alliance of Genome Resources)	Chr2			XP_694358 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.