Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PATJ	HGNC:28881 (HGNC) 10207 (Entrez Gene) 603199 (OMIM) PATJ (Alliance of Genome Resources)	Chr1 p31.3	Chr1:61742477-62178675 (+) GRCh38		Q8NI35 (UniProt | EBI) NM_001350145 (RefSeq)
mouse	Patj	MGI:1277960 (MGI) 12695 (Entrez Gene) Gene Tree Patj (Alliance of Genome Resources)	Chr4 45.6 cM	Chr4:98284022-98607840 (+) GRCm39		ENSMUSG00000061859 (Ensembl Gene Model) ENSMUSP00000158719 (Ensembl) ENSMUST00000238306 (Ensembl)
rat	Patj	RGD:1565362 (Rat Genome Database) 140581 (Entrez Gene) Patj (Alliance of Genome Resources)	Chr5 q33			F1MAD2 (UniProt | EBI) NM_080398 (RefSeq)
zebrafish	patj	ZDB-GENE-030616-129 (Zebrafish Model Organism Database) 368723 (Entrez Gene) patj (Alliance of Genome Resources)	Chr22			NP_001120657 (RefSeq) NM_001127185 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.