Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	VAX2	HGNC:12661 (HGNC) 25806 (Entrez Gene) 604295 (OMIM) VAX2 (Alliance of Genome Resources)	Chr2 p13.3	Chr2:70900576-70965373 (+) GRCh38		Q9UIW0 (UniProt | EBI) NM_012476 (RefSeq)
mouse	Vax2	MGI:1346018 (MGI) 24113 (Entrez Gene) Gene Tree Vax2 (Alliance of Genome Resources)	Chr6 35.94 cM	Chr6:83688246-83715295 (+) GRCm39		ENSMUSG00000034777 (Ensembl Gene Model) ENSMUSP00000035976 (Ensembl) ENSMUST00000037807 (Ensembl)
rat	Vax2	RGD:621133 (Rat Genome Database) 64572 (Entrez Gene) Vax2 (Alliance of Genome Resources)	Chr4 q34			Q9JLZ9 (UniProt | EBI) NM_022637 (RefSeq)
zebrafish	vax2	ZDB-GENE-030904-8 (Zebrafish Model Organism Database) 373869 (Entrez Gene) vax2 (Alliance of Genome Resources)	Chr7			Q801E1 (UniProt | EBI) NM_194409 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.