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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HFE HGNC:4886 (HGNC)
3077 (Entrez Gene)
613609 (OMIM)
HFE (Alliance of Genome Resources)
Chr6 p22.2 Chr6:26087226-26098343 (+)
GRCh38
acute lymphoblastic leukemia
Alzheimer's disease
aphthous stomatitis
beta thalassemia
breast cancer
cardiomyopathy
colorectal cancer
Crohn's disease
cystic fibrosis
diabetes mellitus
diabetic retinopathy
dilated cardiomyopathy
hemochromatosis
hemochromatosis type 1
hepatic veno-occlusive disease
hepatocellular carcinoma
intestinal obstruction
iron deficiency anemia
juvenile rheumatoid arthritis
liver cirrhosis
liver disease
metabolic dysfunction-associated steatotic liver disease
multiple myeloma
myelodysplastic syndrome
myelofibrosis
myocardial infarction
obesity
osteoarthritis
ovarian cancer
polycythemia vera
polymyalgia rheumatica
porphyria cutanea tarda
rheumatoid arthritis
type 2 diabetes mellitus
Q30201 (UniProt | EBI)
NM_139008 (RefSeq)
mouse Hfe MGI:109191 (MGI)
15216 (Entrez Gene)
Gene Tree
Hfe (Alliance of Genome Resources)
Chr13 9.88 cM Chr13:23886017-23894837 (-)
GRCm39
hemochromatosis type 1
15216 (NCBI Gene Model)
P70387 (UniProt | EBI)
NM_010424 (RefSeq)
rat Hfe RGD:2793 (Rat Genome Database)
29199 (Entrez Gene)
Hfe (Alliance of Genome Resources)
Chr17 p11 O35799 (UniProt | EBI)
NM_001173434 (RefSeq)
zebrafish mhc1zaa ZDB-GENE-030916-1 (Zebrafish Model Organism Database)
378479 (Entrez Gene)
mhc1zaa (Alliance of Genome Resources)
Chr1 NP_919406 (RefSeq)
NM_194425 (RefSeq)
mhc1zba ZDB-GENE-040426-2149 (Zebrafish Model Organism Database)
791453 (Entrez Gene)
mhc1zba (Alliance of Genome Resources)
Chr1 NP_001103588 (RefSeq)
NM_001110118 (RefSeq)
mhc1zca ZDB-GENE-070424-4 (Zebrafish Model Organism Database)
556341 (Entrez Gene)
mhc1zca (Alliance of Genome Resources)
Chr1 NP_001077014 (RefSeq)
NM_001083545 (RefSeq)
mhc1zea ZDB-GENE-070705-176 (Zebrafish Model Organism Database)
565708 (Entrez Gene)
mhc1zea (Alliance of Genome Resources)
Chr1 NP_001083019 (RefSeq)
NM_001089550 (RefSeq)
mhc1zfa ZDB-GENE-130206-9 (Zebrafish Model Organism Database)
102467220 (Entrez Gene)
mhc1zfa (Alliance of Genome Resources)
Chr3 NP_001274027 (RefSeq)
NM_001287098 (RefSeq)
mhc1zja ZDB-GENE-130206-11 (Zebrafish Model Organism Database)
571647 (Entrez Gene)
mhc1zja (Alliance of Genome Resources)
Chr3 NP_001103188 (RefSeq)
NM_001109718 (RefSeq)
mhc1zka ZDB-GENE-130206-5 (Zebrafish Model Organism Database)
100536229 (Entrez Gene)
mhc1zka (Alliance of Genome Resources)
ChrUN NP_001289174 (RefSeq)
NM_001302245 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory