Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CACNA1F	HGNC:1393 (HGNC) 778 (Entrez Gene) 300110 (OMIM) CACNA1F (Alliance of Genome Resources)	ChrX p11.23	ChrX:49205063-49233371 (-) GRCh38	Aland Island eye disease congenital stationary night blindness congenital stationary night blindness 2A X-linked cone-rod dystrophy 3	O60840 (UniProt | EBI) NM_005183 (RefSeq)
mouse	Cacna1f	MGI:1859639 (MGI) 54652 (Entrez Gene) Gene Tree Cacna1f (Alliance of Genome Resources)	ChrX 3.42 cM	ChrX:7473342-7501435 (+) GRCm39	congenital stationary night blindness 2A	54652 (NCBI Gene Model) Q9JIS7 (UniProt | EBI) NM_019582 (RefSeq)
rat	Cacna1f	RGD:621535 (Rat Genome Database) 114493 (Entrez Gene) Cacna1f (Alliance of Genome Resources)	ChrX q12			NP_446153 (RefSeq) NM_053701 (RefSeq)
zebrafish	cacna1fa	ZDB-GENE-091204-7 (Zebrafish Model Organism Database) 793708 (Entrez Gene) cacna1fa (Alliance of Genome Resources)	Chr8			XP_021334158 (RefSeq)
	cacna1fb	ZDB-GENE-031104-1 (Zebrafish Model Organism Database) 559964 (Entrez Gene) cacna1fb (Alliance of Genome Resources)	Chr8			NP_001311425 (RefSeq) NM_001324496 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.