Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	USF1	HGNC:12593 (HGNC) 7391 (Entrez Gene) 191523 (OMIM) USF1 (Alliance of Genome Resources)	Chr1 q23.3	Chr1:161039251-161045977 (-) GRCh38	cardiovascular system disease type 2 diabetes mellitus	P22415 (UniProt | EBI) NM_001276373 (RefSeq)
mouse	Usf1	MGI:99542 (MGI) 22278 (Entrez Gene) Gene Tree Usf1 (Alliance of Genome Resources)	Chr1 79.4 cM	Chr1:171238881-171246327 (+) GRCm39		22278 (NCBI Gene Model) Q61069 (UniProt | EBI) NM_001421590 (RefSeq)
rat	Usf1	RGD:620974 (Rat Genome Database) 83586 (Entrez Gene) Usf1 (Alliance of Genome Resources)	Chr13 q24			NP_113965 (RefSeq) NM_001430849 (RefSeq)
zebrafish	usf1	ZDB-GENE-040426-1072 (Zebrafish Model Organism Database) 393266 (Entrez Gene) usf1 (Alliance of Genome Resources)	Chr15			NP_956590 (RefSeq) NM_200296 (RefSeq)
	usf1l	ZDB-GENE-040426-2269 (Zebrafish Model Organism Database) 406475 (Entrez Gene) usf1l (Alliance of Genome Resources)	Chr5			NP_998359 (RefSeq) NM_213194 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.