Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PTPN3	HGNC:9655 (HGNC) 5774 (Entrez Gene) 176877 (OMIM) PTPN3 (Alliance of Genome Resources)	Chr9 q31.3	Chr9:109375466-109538420 (-) GRCh38		P26045 (UniProt | EBI) NM_001145372 (RefSeq)
mouse	Ptpn3	MGI:105307 (MGI) 545622 (Entrez Gene) Gene Tree Ptpn3 (Alliance of Genome Resources)	Chr4 31.66 cM	Chr4:57190841-57301837 (-) GRCm39		ENSMUSG00000038764 (Ensembl Gene Model) ENSMUSP00000075063 (Ensembl) ENSMUST00000075637 (Ensembl)
rat	Ptpn3	RGD:1311363 (Rat Genome Database) 362524 (Entrez Gene) Ptpn3 (Alliance of Genome Resources)	Chr5 q24			NP_001094224 (RefSeq) NM_001100754 (RefSeq)
zebrafish	ptpn3	ZDB-GENE-030131-2934 (Zebrafish Model Organism Database) 407635 (Entrez Gene) ptpn3 (Alliance of Genome Resources)	Chr16			XP_687930 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.