Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	LSM12	HGNC:26407 (HGNC) 124801 (Entrez Gene) 611793 (OMIM) LSM12 (Alliance of Genome Resources)	Chr17 q21.31	Chr17:44034328-44067619 (-) GRCh38		Q3MHD2 (UniProt | EBI) NM_001369484 (RefSeq)
mouse	Lsm12	MGI:1919592 (MGI) 268490 (Entrez Gene) Gene Tree Lsm12 (Alliance of Genome Resources)	Chr11 65.6 cM	Chr11:102053323-102076122 (-) GRCm39		ENSMUSG00000020922 (Ensembl Gene Model) ENSMUSP00000021297 (Ensembl) ENSMUST00000021297 (Ensembl)
rat	Lsm12	RGD:1309441 (Rat Genome Database) 287731 (Entrez Gene) Lsm12 (Alliance of Genome Resources)	Chr10 q32.1			NP_001099313 (RefSeq) NM_001105843 (RefSeq)
zebrafish	lsm12a	ZDB-GENE-040516-12 (Zebrafish Model Organism Database) 407986 (Entrez Gene) lsm12a (Alliance of Genome Resources)	Chr3			Q6NSN1 (UniProt | EBI) NM_214817 (RefSeq)
	lsm12b	ZDB-GENE-040426-2164 (Zebrafish Model Organism Database) 406422 (Entrez Gene) lsm12b (Alliance of Genome Resources)	Chr12			Q6PBA2 (UniProt | EBI) NM_213148 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.