Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PGK1	HGNC:8896 (HGNC) 5230 (Entrez Gene) 311800 (OMIM) PGK1 (Alliance of Genome Resources)	ChrX q21.1	ChrX:77910739-78129295 (+) GRCh38	hemolytic anemia phosphoglycerate kinase 1 deficiency	P00558 (UniProt | EBI) NM_000291 (RefSeq)
mouse	Pgk1	MGI:97555 (MGI) 18655 (Entrez Gene) Gene Tree Pgk1 (Alliance of Genome Resources)	ChrX 47.36 cM	ChrX:105230706-105247305 (+) GRCm39		18655 (NCBI Gene Model) P09411 (UniProt | EBI) NM_008828 (RefSeq)
rat	Pgk1	RGD:619878 (Rat Genome Database) 24644 (Entrez Gene) Pgk1 (Alliance of Genome Resources)	ChrX q22			P16617 (UniProt | EBI) NM_053291 (RefSeq)
	Pgk1l1	RGD:1560402 (Rat Genome Database) 499525 (Entrez Gene) Pgk1l1 (Alliance of Genome Resources)	Chr2 q14			XP_038959434 (RefSeq)
zebrafish	pgk1	ZDB-GENE-040426-2711 (Zebrafish Model Organism Database) 406696 (Entrez Gene) pgk1 (Alliance of Genome Resources)	Chr21			NP_998552 (RefSeq) NM_213387 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.