Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RAP1A	HGNC:9855 (HGNC) 5906 (Entrez Gene) 179520 (OMIM) RAP1A (Alliance of Genome Resources)	Chr1 p13.2	Chr1:111542009-111716691 (+) GRCh38		P62834 (UniProt | EBI) NM_001394066 (RefSeq)
mouse	Rap1a	MGI:97852 (MGI) 109905 (Entrez Gene) Gene Tree Rap1a (Alliance of Genome Resources)	Chr3 46.45 cM	Chr3:105634583-105708652 (-) GRCm39		ENSMUSG00000068798 (Ensembl Gene Model) ENSMUSP00000088174 (Ensembl) ENSMUST00000090678 (Ensembl)
rat	Rap1a	RGD:1359694 (Rat Genome Database) 295347 (Entrez Gene) Rap1a (Alliance of Genome Resources)	Chr2 q34			P62836 (UniProt | EBI) NM_001005765 (RefSeq)
zebrafish	rap1aa	ZDB-GENE-040625-167 (Zebrafish Model Organism Database) 415242 (Entrez Gene) rap1aa (Alliance of Genome Resources)	Chr8			NP_001002152 (RefSeq) NM_001002152 (RefSeq)
	rap1ab	ZDB-GENE-040426-2738 (Zebrafish Model Organism Database) 406714 (Entrez Gene) rap1ab (Alliance of Genome Resources)	Chr11			NP_998570 (RefSeq) NM_001243179 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.