Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	PLPP4	HGNC:23531 (HGNC) 196051 (Entrez Gene) PLPP4 (Alliance of Genome Resources)	Chr10 q26.12	Chr10:120456954-120592065 (+) GRCh38		Q5VZY2 (UniProt | EBI) NM_001318168 (RefSeq)
mouse	Plpp4	MGI:2685936 (MGI) 381925 (Entrez Gene) Gene Tree Plpp4 (Alliance of Genome Resources)	Chr7 71.63 cM	Chr7:128858755-128993136 (+) GRCm39		ENSMUSG00000070366 (Ensembl Gene Model) ENSMUSP00000091557 (Ensembl) ENSMUST00000094018 (Ensembl)
rat	Plpp4	RGD:1306289 (Rat Genome Database) 309014 (Entrez Gene) Plpp4 (Alliance of Genome Resources)	Chr1 q37			NP_001178560 (RefSeq) NM_001191631 (RefSeq)
zebrafish	plpp4	ZDB-GENE-081107-53 (Zebrafish Model Organism Database) 100334794 (Entrez Gene) plpp4 (Alliance of Genome Resources)	Chr13			XP_002664129 (RefSeq)
	plpp5	ZDB-GENE-040704-54 (Zebrafish Model Organism Database) 431758 (Entrez Gene) plpp5 (Alliance of Genome Resources)	Chr10			NP_001002211 (RefSeq) NM_001002211 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.