Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	RAB40A	HGNC:18283 (HGNC) 142684 (Entrez Gene) 301065 (OMIM) RAB40A (Alliance of Genome Resources)	ChrX q22.2	ChrX:103493266-103519489 (-) GRCh38		Q8WXH6 (UniProt | EBI) NM_080879 (RefSeq)
	RAB40AL	HGNC:25410 (HGNC) 282808 (Entrez Gene) 300405 (OMIM) RAB40AL (Alliance of Genome Resources)	ChrX q22.1			P0C0E4 (UniProt | EBI) NM_001031834 (RefSeq)
	RAB40B	HGNC:18284 (HGNC) 10966 (Entrez Gene) 619550 (OMIM) RAB40B (Alliance of Genome Resources)	Chr17 q25.3	Chr17:82654973-82698698 (-) GRCh38		Q12829 (UniProt | EBI) NM_006822 (RefSeq)
mouse	Rab40b	MGI:2183451 (MGI) 217371 (Entrez Gene) Gene Tree Rab40b (Alliance of Genome Resources)	Chr11 85.28 cM	Chr11:121246951-121279077 (-) GRCm39		ENSMUSG00000025170 (Ensembl Gene Model) ENSMUSP00000101713 (Ensembl) ENSMUST00000106107 (Ensembl)
rat	Rab40b	RGD:1305663 (Rat Genome Database) 303754 (Entrez Gene) Rab40b (Alliance of Genome Resources)	Chr10 q32.3			NP_001100546 (RefSeq) NM_001107076 (RefSeq)
zebrafish	rab40b	ZDB-GENE-040718-257 (Zebrafish Model Organism Database) 436797 (Entrez Gene) rab40b (Alliance of Genome Resources)	Chr12			NP_001002524 (RefSeq) NM_001002524 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.