Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SAT2	HGNC:23160 (HGNC) 112483 (Entrez Gene) 611463 (OMIM) SAT2 (Alliance of Genome Resources)	Chr17 p13.1	Chr17:7626234-7627876 (-) GRCh38		Q96F10 (UniProt | EBI) NM_001320846 (RefSeq)
mouse	Sat2	MGI:1916465 (MGI) 69215 (Entrez Gene) Gene Tree Sat2 (Alliance of Genome Resources)	Chr11 42.86 cM	Chr11:69512850-69514696 (+) GRCm39		ENSMUSG00000069835 (Ensembl Gene Model) ENSMUSP00000104296 (Ensembl) ENSMUST00000108656 (Ensembl)
rat	Sat2	RGD:1307869 (Rat Genome Database) 360547 (Entrez Gene) Sat2 (Alliance of Genome Resources)	Chr10 q24			NP_001101748 (RefSeq) NM_001108278 (RefSeq)
zebrafish	sat2a.1	ZDB-GENE-160728-17 (Zebrafish Model Organism Database) 569184 (Entrez Gene) sat2a.1 (Alliance of Genome Resources)	Chr7			XP_697643 (RefSeq)
	sat2a.2	ZDB-GENE-041212-21 (Zebrafish Model Organism Database) 494055 (Entrez Gene) sat2a.2 (Alliance of Genome Resources)	Chr7			NP_001008598 (RefSeq) NM_001008598 (RefSeq)
	sat2b	ZDB-GENE-040718-292 (Zebrafish Model Organism Database) 436827 (Entrez Gene) sat2b (Alliance of Genome Resources)	Chr5			NP_001002554 (RefSeq) NM_001362464 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.