Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	ATXN7L2	HGNC:28713 (HGNC) 127002 (Entrez Gene) ATXN7L2 (Alliance of Genome Resources)	Chr1 p13.3	Chr1:109483479-109492804 (+) GRCh38		Q5T6C5 (UniProt | EBI) NM_001350177 (RefSeq)
mouse	Atxn7l2	MGI:1919772 (MGI) 72522 (Entrez Gene) Gene Tree Atxn7l2 (Alliance of Genome Resources)	Chr3 46.87 cM	Chr3:108109538-108117843 (-) GRCm39		72522 (NCBI Gene Model) NP_001276474 (RefSeq) NM_175183 (RefSeq)
rat	Atxn7l2	RGD:1307047 (Rat Genome Database) 310781 (Entrez Gene) Atxn7l2 (Alliance of Genome Resources)	Chr2 q34			NP_001385673 (RefSeq) NM_001398744 (RefSeq)
zebrafish	atxn7l2a	ZDB-GENE-060519-13 (Zebrafish Model Organism Database) 692316 (Entrez Gene) atxn7l2a (Alliance of Genome Resources)	Chr11			NP_001038750 (RefSeq) NM_001045285 (RefSeq)
	atxn7l2b	ZDB-GENE-040718-403 (Zebrafish Model Organism Database) 436928 (Entrez Gene) atxn7l2b (Alliance of Genome Resources)	Chr8			NP_001002655 (RefSeq) NM_001002655 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.