Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	IFT172	HGNC:30391 (HGNC) 26160 (Entrez Gene) 607386 (OMIM) IFT172 (Alliance of Genome Resources)	Chr2 p23.3	Chr2:27444377-27489805 (-) GRCh38	Bardet-Biedl syndrome 20 retinitis pigmentosa 71 short-rib thoracic dysplasia 10 with or without polydactyly	Q9UG01 (UniProt | EBI) NM_001410739 (RefSeq)
mouse	Ift172	MGI:2682064 (MGI) 67661 (Entrez Gene) Gene Tree Ift172 (Alliance of Genome Resources)	Chr5 17.27 cM	Chr5:31410623-31448458 (-) GRCm39	atrioventricular septal defect retinal degeneration VACTERL association	67661 (NCBI Gene Model) Q6VH22 (UniProt | EBI) NM_026298 (RefSeq)
rat	Ift172	RGD:620744 (Rat Genome Database) 116475 (Entrez Gene) Ift172 (Alliance of Genome Resources)	Chr6			Q9JKU3 (UniProt | EBI) NM_001434132 (RefSeq)
zebrafish	ift172	ZDB-GENE-040827-1 (Zebrafish Model Organism Database) 432389 (Entrez Gene) ift172 (Alliance of Genome Resources)	Chr20			Q5RHH4 (UniProt | EBI) NM_001002312 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.