Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	REEP6	HGNC:30078 (HGNC) 92840 (Entrez Gene) 609346 (OMIM) REEP6 (Alliance of Genome Resources)	Chr19 p13.3	Chr19:1491166-1497927 (+) GRCh38	retinitis pigmentosa 77	Q96HR9 (UniProt | EBI) NM_138393 (RefSeq)
mouse	Reep6	MGI:1917585 (MGI) 70335 (Entrez Gene) Gene Tree Reep6 (Alliance of Genome Resources)	Chr10 39.72 cM	Chr10:80165831-80172275 (+) GRCm39	retinitis pigmentosa 77	70335 (NCBI Gene Model) Q9JM62 (UniProt | EBI) NM_139292 (RefSeq)
rat	Reep6	RGD:1309508 (Rat Genome Database) 362835 (Entrez Gene) Reep6 (Alliance of Genome Resources)	Chr7 q11			Q5XI60 (UniProt | EBI) NM_001013218 (RefSeq)
zebrafish	reep6	ZDB-GENE-040912-98 (Zebrafish Model Organism Database) 447918 (Entrez Gene) reep6 (Alliance of Genome Resources)	Chr11			Q66IF1 (UniProt | EBI) NM_001004656 (RefSeq)
	zgc:101744	ZDB-GENE-050320-111 (Zebrafish Model Organism Database) 541409 (Entrez Gene) zgc:101744 (Alliance of Genome Resources)	Chr2			NP_001013554 (RefSeq) NM_001013536 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.