Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SCCPDH	HGNC:24275 (HGNC) 51097 (Entrez Gene) 620831 (OMIM) SCCPDH (Alliance of Genome Resources)	Chr1 q44	Chr1:246724409-246768137 (+) GRCh38		Q8NBX0 (UniProt | EBI) NM_016002 (RefSeq)
mouse	Sccpdh	MGI:1924486 (MGI) 109232 (Entrez Gene) Gene Tree Sccpdh (Alliance of Genome Resources)	Chr1 83.62 cM	Chr1:179495796-179514754 (+) GRCm39		109232 (NCBI Gene Model) Q8R127 (UniProt | EBI) NR_184455 (RefSeq)
rat	Sccpdh	RGD:1311440 (Rat Genome Database) 305021 (Entrez Gene) Sccpdh (Alliance of Genome Resources)	Chr13 q26			Q6AY30 (UniProt | EBI) NM_001013985 (RefSeq)
zebrafish	sccpdha.1	ZDB-GENE-040718-51 (Zebrafish Model Organism Database) 436632 (Entrez Gene) sccpdha.1 (Alliance of Genome Resources)	Chr17			NP_001002359 (RefSeq) NM_001002359 (RefSeq)
	sccpdha.2	ZDB-GENE-080212-12 (Zebrafish Model Organism Database) 569379 (Entrez Gene) sccpdha.2 (Alliance of Genome Resources)	Chr17			NP_001107908 (RefSeq) NM_001114436 (RefSeq)
	sccpdhb	ZDB-GENE-041010-211 (Zebrafish Model Organism Database) 407665 (Entrez Gene) sccpdhb (Alliance of Genome Resources)	Chr20			NP_001005574 (RefSeq) NM_001005574 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.