Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SOBP	HGNC:29256 (HGNC) 55084 (Entrez Gene) 613667 (OMIM) SOBP (Alliance of Genome Resources)	Chr6 q21	Chr6:107490106-107661306 (+) GRCh38		A7XYQ1 (UniProt | EBI) NM_018013 (RefSeq)
mouse	Sobp	MGI:1924427 (MGI) 109205 (Entrez Gene) Gene Tree Sobp (Alliance of Genome Resources)	Chr10 22.89 cM	Chr10:42878496-43050526 (-) GRCm39		ENSMUSG00000038248 (Ensembl Gene Model) ENSMUSP00000040072 (Ensembl) ENSMUST00000040275 (Ensembl)
rat	Sobp	RGD:1560479 (Rat Genome Database) 309860 (Entrez Gene) Sobp (Alliance of Genome Resources)	Chr20 q13			A7XYI6 (UniProt | EBI) NM_001412110 (RefSeq)
zebrafish	sobpa	ZDB-GENE-090313-313 (Zebrafish Model Organism Database) 573683 (Entrez Gene) sobpa (Alliance of Genome Resources)	Chr13			A5X7A0 (UniProt | EBI) NM_001098618 (RefSeq)
	sobpb	ZDB-GENE-041210-8 (Zebrafish Model Organism Database) 100006088 (Entrez Gene) sobpb (Alliance of Genome Resources)	Chr4			A7XYJ6 (UniProt | EBI) NM_001114983 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.