Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	FOXJ1	HGNC:3816 (HGNC) 2302 (Entrez Gene) 602291 (OMIM) FOXJ1 (Alliance of Genome Resources)	Chr17 q25.1	Chr17:76136333-76141245 (-) GRCh38	primary ciliary dyskinesia 43	Q92949 (UniProt | EBI) NM_001454 (RefSeq)
mouse	Foxj1	MGI:1347474 (MGI) 15223 (Entrez Gene) Gene Tree Foxj1 (Alliance of Genome Resources)	Chr11 81.16 cM	Chr11:116221530-116226225 (-) GRCm39	congenital heart disease Kartagener syndrome primary ciliary dyskinesia	ENSMUSG00000034227 (Ensembl Gene Model) ENSMUSP00000038351 (Ensembl) ENSMUST00000036215 (Ensembl)
rat	Foxj1	RGD:621764 (Rat Genome Database) 116557 (Entrez Gene) Foxj1 (Alliance of Genome Resources)	Chr10			Q63247 (UniProt | EBI) NM_053832 (RefSeq)
zebrafish	foxj1a	ZDB-GENE-060929-1178 (Zebrafish Model Organism Database) 767737 (Entrez Gene) foxj1a (Alliance of Genome Resources)	Chr3			F1QDF8 (UniProt | EBI) NM_001076706 (RefSeq)
	foxj1b	ZDB-GENE-041212-76 (Zebrafish Model Organism Database) 494105 (Entrez Gene) foxj1b (Alliance of Genome Resources)	Chr12			F1R8Z9 (UniProt | EBI) NM_001008648 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.