Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	GZMA	HGNC:4708 (HGNC) 3001 (Entrez Gene) 140050 (OMIM) GZMA (Alliance of Genome Resources)	Chr5 q11.2	Chr5:55102646-55110252 (+) GRCh38		P12544 (UniProt | EBI) NM_006144 (RefSeq)
mouse	Gzma	MGI:109266 (MGI) 14938 (Entrez Gene) Gene Tree Gzma (Alliance of Genome Resources)	Chr13 63.93 cM	Chr13:113230359-113237515 (-) GRCm39		ENSMUSG00000023132 (Ensembl Gene Model) ENSMUSP00000023897 (Ensembl) ENSMUST00000023897 (Ensembl)
rat	Gzma	RGD:628640 (Rat Genome Database) 266708 (Entrez Gene) Gzma (Alliance of Genome Resources)	Chr2 q14			NP_703198 (RefSeq) NM_153468 (RefSeq)
zebrafish	gzma	ZDB-GENE-091204-156 (Zebrafish Model Organism Database) 795070 (Entrez Gene) gzma (Alliance of Genome Resources)	Chr21			XP_001335166 (RefSeq)
	si:dkey-21e2.3	ZDB-GENE-050208-618 (Zebrafish Model Organism Database) 100034618 (Entrez Gene) si:dkey-21e2.3 (Alliance of Genome Resources)	Chr22
	si:dkey-21e2.8	ZDB-GENE-050208-459 (Zebrafish Model Organism Database) 100034561 (Entrez Gene) si:dkey-21e2.8 (Alliance of Genome Resources)	Chr22			XP_068075469 (RefSeq)
	si:dkey-21e2.10	ZDB-GENE-050208-778 (Zebrafish Model Organism Database) 556860 (Entrez Gene) si:dkey-21e2.10 (Alliance of Genome Resources)	Chr22			XP_009294620 (RefSeq)
	si:dkey-21e2.11	ZDB-GENE-050208-539 (Zebrafish Model Organism Database) 100034562 (Entrez Gene) si:dkey-21e2.11 (Alliance of Genome Resources)	Chr22			XP_068075085 (RefSeq)
	si:dkey-21e2.12	ZDB-GENE-050208-697 (Zebrafish Model Organism Database) 100034451 (Entrez Gene) si:dkey-21e2.12 (Alliance of Genome Resources)	Chr22
	si:dkey-21e2.14	ZDB-GENE-050208-699 (Zebrafish Model Organism Database) 100034620 (Entrez Gene) si:dkey-21e2.14 (Alliance of Genome Resources)	Chr22			XP_003201094 (RefSeq)
	si:dkey-21e2.15	ZDB-GENE-050208-780 (Zebrafish Model Organism Database) 567711 (Entrez Gene) si:dkey-21e2.15 (Alliance of Genome Resources)	Chr22			XP_021329142 (RefSeq)
	si:dkey-21e2.16	ZDB-GENE-050208-698 (Zebrafish Model Organism Database) 556598 (Entrez Gene) si:dkey-21e2.16 (Alliance of Genome Resources)	Chr22			NP_001038273 (RefSeq) NM_001044808 (RefSeq)
	si:dkey-78l4.2	ZDB-GENE-060503-647 (Zebrafish Model Organism Database) 561111 (Entrez Gene) si:dkey-78l4.2 (Alliance of Genome Resources)	Chr22			XP_068072737 (RefSeq)
	si:dkey-78l4.4	ZDB-GENE-060503-836 (Zebrafish Model Organism Database) 100034636 (Entrez Gene) si:dkey-78l4.4 (Alliance of Genome Resources)	Chr22
	si:dkey-78l4.6	ZDB-GENE-060503-83 (Zebrafish Model Organism Database) 100034588 (Entrez Gene) si:dkey-78l4.6 (Alliance of Genome Resources)	Chr22			XP_021325265 (RefSeq)
	si:dkey-78l4.7	ZDB-GENE-060503-176 (Zebrafish Model Organism Database) 100034654 (Entrez Gene) si:dkey-78l4.7 (Alliance of Genome Resources)	Chr22			XP_003201098 (RefSeq)
	si:dkey-78l4.10	ZDB-GENE-060503-175 (Zebrafish Model Organism Database) 100034472 (Entrez Gene) si:dkey-78l4.10 (Alliance of Genome Resources)	Chr22			XP_017208791 (RefSeq)
	si:dkey-78l4.13	ZDB-GENE-060503-459 (Zebrafish Model Organism Database) 100034660 (Entrez Gene) si:dkey-78l4.13 (Alliance of Genome Resources)	Chr22			XP_068075092 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.