Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TRIM2	HGNC:15974 (HGNC) 23321 (Entrez Gene) 614141 (OMIM) TRIM2 (Alliance of Genome Resources)	Chr4 q31.3	Chr4:153152163-153339319 (+) GRCh38	Charcot-Marie-Tooth disease type 2R	Q9C040 (UniProt | EBI) NM_001130067 (RefSeq)
mouse	Trim2	MGI:1933163 (MGI) 80890 (Entrez Gene) Gene Tree Trim2 (Alliance of Genome Resources)	Chr3 37.48 cM	Chr3:84067746-84214184 (-) GRCm39		ENSMUSG00000027993 (Ensembl Gene Model) ENSMUSP00000049902 (Ensembl) ENSMUST00000054990 (Ensembl)
rat	Trim2	RGD:1310981 (Rat Genome Database) 361970 (Entrez Gene) Trim2 (Alliance of Genome Resources)	Chr2 q34			D3ZQG6 (UniProt | EBI) NM_001430453 (RefSeq)
zebrafish	trim2a	ZDB-GENE-050327-99 (Zebrafish Model Organism Database) 100003782 (Entrez Gene) trim2a (Alliance of Genome Resources)	Chr1			NP_001014393 (RefSeq) NM_001014371 (RefSeq)
	trim2b	ZDB-GENE-090312-70 (Zebrafish Model Organism Database) 558046 (Entrez Gene) trim2b (Alliance of Genome Resources)	Chr1			XP_009304581 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.