Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SP140	HGNC:17133 (HGNC) 11262 (Entrez Gene) 608602 (OMIM) SP140 (Alliance of Genome Resources)	Chr2 q37.1	Chr2:230186151-230316571 (+) GRCh38		Q13342 (UniProt | EBI) NM_007237 (RefSeq)
mouse	Sp140l2	MGI:3612702 (MGI) 620078 (Entrez Gene) Gene Tree Sp140l2 (Alliance of Genome Resources)	Chr1 43.44 cM	Chr1:85219007-85260602 (-) GRCm39		620078 (NCBI Gene Model) NP_780428 (RefSeq) NM_175219 (RefSeq)
rat	Sp140	RGD:1306355 (Rat Genome Database) 316580 (Entrez Gene) Sp140 (Alliance of Genome Resources)	Chr9 q35			NP_001012133 (RefSeq) NM_001012133 (RefSeq)
zebrafish	sp100.1	ZDB-GENE-141212-239 (Zebrafish Model Organism Database) 796843 (Entrez Gene) sp100.1 (Alliance of Genome Resources)	Chr3			XP_001337239 (RefSeq)
	sp100.3	ZDB-GENE-130530-997 (Zebrafish Model Organism Database) 555649 (Entrez Gene) sp100.3 (Alliance of Genome Resources)	Chr3			XP_021329292 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.