Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	TAS2R39	HGNC:18886 (HGNC) 259285 (Entrez Gene) TAS2R39 (Alliance of Genome Resources)	Chr7 q34	Chr7:143183419-143184435 (+) GRCh38		P59534 (UniProt | EBI) NM_176881 (RefSeq)
mouse	Tas2r139	MGI:2681308 (MGI) 353148 (Entrez Gene) Gene Tree Tas2r139 (Alliance of Genome Resources)	Chr6 20.4 cM	Chr6:42117870-42118829 (+) GRCm39		353148 (NCBI Gene Model) Q7TQA5 (UniProt | EBI) NM_181275 (RefSeq)
rat	Tas2r139	RGD:1595436 (Rat Genome Database) 680188 (Entrez Gene) Tas2r139 (Alliance of Genome Resources)	Chr4 q24			Q67ER9 (UniProt | EBI) NM_001080905 (RefSeq)
zebrafish	tas2r200.1	ZDB-GENE-070917-4 (Zebrafish Model Organism Database) 664690 (Entrez Gene) tas2r200.1 (Alliance of Genome Resources)	Chr8			NP_001034919 (RefSeq) NM_001039830 (RefSeq)
	tas2r200.2	ZDB-GENE-050510-4 (Zebrafish Model Organism Database) 553134 (Entrez Gene) tas2r200.2 (Alliance of Genome Resources)	Chr8			NP_001018341 (RefSeq) NM_001020505 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.