Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
mouse	F830016B08Rik	MGI:3588218 (MGI) 240328 (Entrez Gene) Gene Tree F830016B08Rik (Alliance of Genome Resources)	Chr18 34.36 cM	Chr18:60426452-60436088 (+) GRCm39		ENSMUSG00000090942 (Ensembl Gene Model) ENSMUSP00000131437 (Ensembl) ENSMUST00000171297 (Ensembl)
rat	Ifgga4l	RGD:1305184 (Rat Genome Database) 307412 (Entrez Gene) Ifgga4l (Alliance of Genome Resources)	Chr18 q12.1			NP_001381913 (RefSeq) NM_001394984 (RefSeq)
zebrafish	irgf1	ZDB-GENE-051212-5 (Zebrafish Model Organism Database) 100137101 (Entrez Gene) irgf1 (Alliance of Genome Resources)	Chr19			NP_001307352 (RefSeq) NM_001114698 (RefSeq)
	irgf3	ZDB-GENE-051212-6 (Zebrafish Model Organism Database) 797731 (Entrez Gene) irgf3 (Alliance of Genome Resources)	Chr19			XP_001338197 (RefSeq)
	si:ch73-171o20.1	ZDB-GENE-140106-80 (Zebrafish Model Organism Database) 563833 (Entrez Gene) si:ch73-171o20.1 (Alliance of Genome Resources)	Chr19			XP_017207834 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.