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Vertebrate Homology
Source
Alliance of Genome Resources

 
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NLRP4 HGNC:22943 (HGNC)
147945 (Entrez Gene)
609645 (OMIM)
NLRP4 (Alliance of Genome Resources)
Chr19 q13.43 Chr19:55836540-55881855 (+)
GRCh38
Q96MN2 (UniProt | EBI)
NM_134444 (RefSeq)
mouse Nlrp4c MGI:1890518 (MGI)
83564 (Entrez Gene)
Gene Tree
Nlrp4c (Alliance of Genome Resources)
Chr7 3.5 cM Chr7:6048160-6108148 (+)
GRCm39
83564 (NCBI Gene Model)
Q3TKR3 (UniProt | EBI)
NM_031389 (RefSeq)
rat Nlrp4 RGD:1563529 (Rat Genome Database)
499069 (Entrez Gene)
Nlrp4 (Alliance of Genome Resources)
Chr1 q12 NP_001165635 (RefSeq)
NM_001172164 (RefSeq)
zebrafish nlrc6 ZDB-GENE-060421-8264 (Zebrafish Model Organism Database)
678565 (Entrez Gene)
nlrc6 (Alliance of Genome Resources)
Chr1 XP_068078010 (RefSeq)
NM_001040323 (RefSeq)
nlrc8 ZDB-GENE-070912-363 (Zebrafish Model Organism Database)
795668 (Entrez Gene)
nlrc8 (Alliance of Genome Resources)
Chr15 XP_068069895 (RefSeq)
nlrp12l ZDB-GENE-090313-181 (Zebrafish Model Organism Database)
792926 (Entrez Gene)
nlrp12l (Alliance of Genome Resources)
Chr23 XP_005162399 (RefSeq)
si:ch211-233m11.1 ZDB-GENE-081028-16 (Zebrafish Model Organism Database)
558788 (Entrez Gene)
si:ch211-233m11.1 (Alliance of Genome Resources)
Chr13 XP_005156549 (RefSeq)
si:dkey-23k10.2 ZDB-GENE-131122-52 (Zebrafish Model Organism Database)
565381 (Entrez Gene)
si:dkey-23k10.2 (Alliance of Genome Resources)
Chr15 XP_017206561 (RefSeq)
si:dkey-121n8.7 ZDB-GENE-070912-366 (Zebrafish Model Organism Database)
108179098 (Entrez Gene)
si:dkey-121n8.7 (Alliance of Genome Resources)
Chr15 XP_009290195 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory