Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	USP40	HGNC:20069 (HGNC) 55230 (Entrez Gene) 610570 (OMIM) USP40 (Alliance of Genome Resources)	Chr2 q37.1	Chr2:233475526-233566782 (-) GRCh38		Q9NVE5 (UniProt | EBI) NM_001382303 (RefSeq)
mouse	Usp40	MGI:2443184 (MGI) 227334 (Entrez Gene) Gene Tree Usp40 (Alliance of Genome Resources)	Chr1 44.45 cM	Chr1:87872841-87936273 (-) GRCm39		ENSMUSG00000005501 (Ensembl Gene Model) ENSMUSP00000140107 (Ensembl) ENSMUST00000187758 (Ensembl)
rat	Usp40	RGD:1309613 (Rat Genome Database) 316599 (Entrez Gene) Usp40 (Alliance of Genome Resources)	Chr9 q35			NP_001128357 (RefSeq) NM_001134885 (RefSeq)
zebrafish	usp40	ZDB-GENE-060518-5 (Zebrafish Model Organism Database) 402834 (Entrez Gene) usp40 (Alliance of Genome Resources)	Chr6			XP_001921353 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.