Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SPEF2	HGNC:26293 (HGNC) 79925 (Entrez Gene) 610172 (OMIM) SPEF2 (Alliance of Genome Resources)	Chr5 p13.2	Chr5:35617844-35814611 (+) GRCh38	spermatogenic failure 43	Q9C093 (UniProt | EBI) NM_024867 (RefSeq)
mouse	Spef2	MGI:2443727 (MGI) 320277 (Entrez Gene) Gene Tree Spef2 (Alliance of Genome Resources)	Chr15 4.24 cM	Chr15:9578279-9748954 (-) GRCm39	primary ciliary dyskinesia	320277 (NCBI Gene Model) Q8C9J3 (UniProt | EBI) NM_001305042 (RefSeq)
rat	Spef2	RGD:620450 (Rat Genome Database) 64555 (Entrez Gene) Spef2 (Alliance of Genome Resources)	Chr2 q16			Q9R095 (UniProt | EBI) NM_001415009 (RefSeq)
zebrafish	spef2	ZDB-GENE-060526-47 (Zebrafish Model Organism Database) 553375 (Entrez Gene) spef2 (Alliance of Genome Resources)	Chr5			NP_001121704 (RefSeq) NM_001128232 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.