Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SH3PXD2B	HGNC:29242 (HGNC) 285590 (Entrez Gene) 613293 (OMIM) SH3PXD2B (Alliance of Genome Resources)	Chr5 q35.1	Chr5:172325000-172454525 (-) GRCh38	Frank-Ter Haar syndrome	A1X283 (UniProt | EBI) NM_001017995 (RefSeq)
mouse	Sh3pxd2b	MGI:2442062 (MGI) 268396 (Entrez Gene) Gene Tree Sh3pxd2b (Alliance of Genome Resources)	Chr11 18.89 cM	Chr11:32297820-32378173 (+) GRCm39	glaucoma otitis media	ENSMUSG00000040711 (Ensembl Gene Model) ENSMUSP00000158896 (Ensembl) ENSMUST00000239041 (Ensembl)
rat	Sh3pxd2b	RGD:1309926 (Rat Genome Database) 303021 (Entrez Gene) Sh3pxd2b (Alliance of Genome Resources)	Chr10 q12			NP_001385692 (RefSeq) NM_001398763 (RefSeq)
zebrafish	sh3pxd2b	ZDB-GENE-060810-52 (Zebrafish Model Organism Database) 553242 (Entrez Gene) sh3pxd2b (Alliance of Genome Resources)	Chr21			XP_021324926 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.